Mass spectrometry-based quantitative and functional PTM proteomics and interactomics
Post-translational modification (PTM) and protein-protein interaction networks in eukaryotic cell signaling and cycling
Biotechnology and molecular systems biology
Wang, K., Yang, Z., Qing, D., Ren, F., Liu, S., Zheng, Q., Liu, J., Zhang, W., Dai, C., Wu, M., Chehab, E.W., Braam, J.,Li, Ning*. (2018). Quantitative and functional posttranslational modification proteomics reveals that TREPH1 plays a role in plant touch-delayed bolting. Proceedings of the National Academy of Sciences. 115, E10265–E10274.
Liu, SC, Yu, FC, Yang Z, Wang T, Xiong, H Chang, C, Yu, WC*, and Ning Li* (2018) Establishment of dimethyl labelling-based quantitative acetylproteomics in Arabidopsis.Mol Cell Proteomics 17, 1010 -1027.
Qing, Dongjin, Yang, Zhu, Li, Mingzhe, Wong, Wai Shing, Guo, Guangyu, Liu, Shichang, Guo, Hongwei, Ning Li* (2016) Quantitative and Functional Phosphoproteomic Analysis Reveals that Ethylene Regulates Water Transport via the C-terminal Phosphorylation of Aquaporin PIP2;1 in Arabidopsis. Molecular Plant. 9, 158–174.
Zhu Yang, Guangyu Guo, Manyu Zhang, Claire Y. Liu, Qin Hu, Henry Lam,Han Cheng, Yu Xue, Jiayang Li, and Ning Li*(2013) Stable Isotope Metabolic Labeling-Based Quantitative Phosphoproteomic Analysis of Arabidopsis Mutants Reveals Ethylene-Regulated Time-Dependent Phosphoproteins and Putative Substrates of CONSTITUTIVE TRIPLE RESPONSE 1 Kinase. Mol Cell Proteomics. 12, 3559-3582.
Li Y, Shu Y, Peng C, Zhu L, Guo G, Li, Ning* (2012) AQUIP: Absolute Quantitation of Isoforms of Post-translationally modified proteins in transgenic organism. Mol Cell Proteomics. 2012 11: 272-285.